User:Alexlan

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(Bioinformatics packages: add perl-Bio-Graphics)
(Bioinformatics packages: Bio::Graphics now in repo)
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===In repository===
 
===In repository===
* [http://www.bioperl.org/ bioperl]  ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=234573 review request] ), bioperl-run ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=236877 review request] ) [in repo]  and dependencies:
+
* [http://www.bioperl.org/ bioperl]  ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=234573 review request] ), bioperl-run ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=236877 review request] ) [in repo]  and dependencies:
 
*(Note that the below were based upon packages originally submitted by HunterMatthews that were reviewed and approved but never built)
 
*(Note that the below were based upon packages originally submitted by HunterMatthews that were reviewed and approved but never built)
 
**perl-SVG ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=232193 review request] ) [in repo]  
 
**perl-SVG ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=232193 review request] ) [in repo]  
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**perl-AutoClass ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=234568 review request] ) [in repo]  
 
**perl-AutoClass ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=234568 review request] ) [in repo]  
 
*(Note other deps originally by Hunter: perl-Heap, perl-MIME-Lite, perl-SOAP-Lite were not orphaned, but picked up by other maintainers)
 
*(Note other deps originally by Hunter: perl-Heap, perl-MIME-Lite, perl-SOAP-Lite were not orphaned, but picked up by other maintainers)
 +
* perl-Bio-Graphics ([https://bugzilla.redhat.com/show_bug.cgi?id=481544 review request]) [in repo] formerly part of bioperl, now a standalone CPAN module as of bioperl 1.6.
 
* [http://www.biopython.org biopython]  ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=235989 review request] ) [in repo]  
 
* [http://www.biopython.org biopython]  ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=235989 review request] ) [in repo]  
 
* [http://www.ebi.ac.uk/Wise2/ wise2]  ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=236158 review request] ) [in repo]  
 
* [http://www.ebi.ac.uk/Wise2/ wise2]  ([https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=236158 review request] ) [in repo]  
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===In review queue===
 
===In review queue===
* perl-Bio-Graphics ([https://bugzilla.redhat.com/show_bug.cgi?id=481544 review request]): formerly part of bioperl, now a standalone CPAN module.
 
  
 
===To be packaged===
 
===To be packaged===

Revision as of 02:23, 29 January 2009

Alex Lancaster

Mainly interested in packaging bioinformatics tools for Fedora. Member of SIGs/SciTech .

Useful links

Bioinformatics packages

In repository

In review queue

To be packaged

  • Swarm - agent-based modelling toolkit

Other packages

Ready for review

Other packages I'm interested in maintaining, or helping to maintain

  • SAGE: the open-source computer algebra/mathematics framework (this is a huge package with many dependencies and will require work from multiple maintainers).
  • Bioconductor: bioinformatics packages for R. Many of these packages are now included in Fedora, Pingou is trying to make this a Feature.
  • E-Cell: GPL-licensed cell simulator for systems biology