From Fedora Project Wiki

Revision as of 14:09, 4 September 2009 by Jjmcd (talk | contribs) (R)

Fedora 12 includes a range of packages for science and mathematics.

R

R and many of it's subpackages have been updated to the latest versions. There are a large number of new features which are described in detail on the project's mailing list: https://stat.ethz.ch/pipermail/r-announce/2009/thread.html.

Changed Packages


Package
Fedora 11
Fedora 12
Upstream URL
GMT
4.4.0
4.5.0
http://gmt.soest.hawaii.edu/
GMT-coastlines
1.10
2.0
http://gmt.soest.hawaii.edu/
GMT-coastlines-all
1.10
2.0
http://gmt.soest.hawaii.edu/
GMT-coastlines-full
1.10
2.0
http://gmt.soest.hawaii.edu/
GMT-coastlines-high
1.10
2.0
http://gmt.soest.hawaii.edu/
GMT-common
4.4.0
4.5.0
http://gmt.soest.hawaii.edu/
R
2.9.0
2.9.2
http://www.r-project.org
R-BSgenome.Celegans.UCSC.ce2
1.2.0
1.3.13
http://www.bioconductor.org/packages/2.0/data/annotation/html/BSgenome.Celegans.UCSC.ce2.html
R-Biobase
2.2.2
2.4.1
http://bioconductor.org/packages/2.3/bioc/html/Biobase.html
R-BufferedMatrix
1.6.0
1.8.0
http://bioconductor.org/packages/release/bioc/html/BufferedMatrix.html
R-GeneR
2.13.1
2.14.0
http://www.bioconductor.org/packages/2.4/bioc/html/GeneR.html
R-IRanges
1.1.55
1.2.3
http://bioconductor.org/packages/2.4/bioc/html/IRanges.html
R-RUnit
0.4.21
0.4.22
http://cran.r-project.org/web/packages/RUnit/index.html
R-affyio
1.10.1
1.12.0
http://bioconductor.org/packages/2.3/bioc/html/affyio.html
R-core
2.9.0
2.9.2
http://www.r-project.org
R-devel
2.9.0
2.9.2
http://www.r-project.org
R-hgu95av2probe
2.0.0
2.4.0
http://www.bioconductor.org/packages/2.1/data/annotation/html/hgu95av2probe.html
R-java
2.9.0
2.9.2
http://www.r-project.org
R-java-devel
2.9.0
2.9.2
http://www.r-project.org
R-mAr
1.1
1.1.1
http://cran.r-project.org/contrib
R-multcomp
1.0
1.1
http://cran.r-project.org/web/packages/multcomp/index.html
R-qtl
1.10
1.11
http://cran.r-project.org/web/packages/qtl/
R-qvalue
1.16.0
1.18.0
http://bioconductor.org/packages/2.3/bioc/html/qvalue.html
R-systemfit
1.0
1.1
http://www.systemfit.org/
R-wavethresh
2.2
2.2.11
http://cran.r-project.org/contrib/main/Descriptions/wavethresh.html
alt-ergo
0.8
0.9
http://alt-ergo.lri.fr
boinc-client
6.4.7
6.6.37
http://boinc.berkeley.edu/
boinc-manager
6.4.7
6.6.37
http://boinc.berkeley.edu/
coq
8.1pl4
8.2pl1
http://coq.inria.fr/
coq-coqide
8.1pl4
8.2pl1
http://coq.inria.fr/
coq-doc
8.1pl4
8.2pl1
http://coq.inria.fr/
coq-emacs
8.1pl4
8.2pl1
http://coq.inria.fr/
electric
8.08
8.09
http://www.staticfreesoft.com/
emacs-gnuplot
4.2.4
4.2.5
http://www.gnuplot.info/
emacs-gnuplot-el
4.2.4
4.2.5
http://www.gnuplot.info/
fet
5.7.7
5.10.2
http://lalescu.ro/liviu/fet
fityk
0.8.1
0.8.8
http://fityk.sourceforge.net/
freehdl
0.0.6
0.0.7
http://www.freehdl.seul.org/
gabedit
2.1.17
2.2.4
http://gabedit.sourceforge.net/home.html
genius
1.0.3
1.0.7
http://www.jirka.org/genius.html
genius-devel
1.0.3
1.0.7
http://www.jirka.org/genius.html
geos
3.0.3
3.1.1
http://geos.refractions.net
gerbv
2.2.0
2.3.0
http://gerbv.sourceforge.net/
gmp-ecm
6.2.1
6.2.3
http://gforge.inria.fr/projects/ecm/
gnome-chemistry-utils
0.10.4
0.10.5
http://www.nongnu.org/gchemutils/
gnome-genius
1.0.3
1.0.7
http://www.jirka.org/genius.html
gnuplot
4.2.4
4.2.5
http://www.gnuplot.info/
gnuplot-common
4.2.4
4.2.5
http://www.gnuplot.info/
gnuplot-doc
4.2.4
4.2.5
http://www.gnuplot.info/
gnuplot-minimal
4.2.4
4.2.5
http://www.gnuplot.info/
gnuradio
3.1.3
3.2.2
http://www.gnuradio.org
gnuradio-devel
3.1.3
3.2.2
http://www.gnuradio.org
gnuradio-doc
3.1.3
3.2.2
http://www.gnuradio.org
gnuradio-examples
3.1.3
3.2.2
http://www.gnuradio.org
gonvert
0.2.19
0.2.20
http://unihedron.com/projects/gonvert
gtkwave
3.2.1
3.2.2
http://gtkwave.sourceforge.net/
kicad
2007.07.09
2009.07.07
http://www.lis.inpg.fr/realise_au_lis/kicad/
kst
1.7.0
1.8.0
http://kst.kde.org/
kst-devel
1.7.0
1.8.0
http://kst.kde.org/
kst-docs
1.7.0
1.8.0
http://kst.kde.org/
kst-fits
1.7.0
1.8.0
http://kst.kde.org/
kst-netcdf
1.7.0
1.8.0
http://kst.kde.org/
linsmith
0.99.11
0.99.12
http://jcoppens.com/soft/linsmith/index.en.php
magic
7.5.169
8.0.54
http://opencircuitdesign.com/magic/index.html
mapnik
0.5.2
0.6.1
http://mapnik.org/
maxima
5.17.1
5.19.2
http://maxima.sourceforge.net/
maxima-gui
5.17.1
5.19.2
http://maxima.sourceforge.net/
maxima-runtime-clisp
5.17.1
5.19.2
http://maxima.sourceforge.net/
maxima-runtime-cmucl
5.17.1
5.19.2
http://maxima.sourceforge.net/
maxima-runtime-sbcl
5.17.1
5.19.2
http://maxima.sourceforge.net/
maxima-src
5.17.1
5.19.2
http://maxima.sourceforge.net/
mrpt-apps
0.6.5
0.7.1
http://babel.isa.uma.es/mrpt/
ncl
5.1.0
5.1.1
http://www.ncl.ucar.edu
ncl-common
5.1.0
5.1.1
http://www.ncl.ucar.edu
nco
3.9.7
3.9.8
http://nco.sourceforge.net/
netcdf
4.0.0
4.0.1
http://my.unidata.ucar.edu/content/software/netcdf/index.html
ngspice
18
19
http://ngspice.sourceforge.net/
octave
3.0.5
3.2.2
http://www.octave.org
octave-forge
20080831
20090607
http://octave.sourceforge.net
paraview
3.4.0
3.6.1
http://www.paraview.org/
paraview-data
3.4.0
3.6.1
http://www.paraview.org/
paraview-devel
3.4.0
3.6.1
http://www.paraview.org/
paraview-doc
3.4.0
3.6.1
http://www.paraview.org/
paraview-mpi
3.4.0
3.6.1
http://www.paraview.org/
perl-Verilog
3.121
3.212
http://www.veripool.org/wiki/verilog-perl
picviz
0.5
0.6
http://www.wallinfire.net/picviz
picviz-gui
0.5
0.6
http://www.wallinfire.net/picviz
picviz-plugin-pngcairo
0.5
0.6
http://www.wallinfire.net/picviz
plplot
5.9.2
5.9.4
http://plplot.sourceforge.net/
polyxmass-bin
0.9.7
0.9.8
http://www.polyxmass.org/
pygrace
0.3
0.4
http://www.its.caltech.edu/~mmckerns/software.html
qgis
1.0.1
1.0.2
http://qgis.org/
qgis-grass
1.0.1
1.0.2
http://qgis.org/
qgis-python
1.0.1
1.0.2
http://qgis.org/
qgis-theme-classic
1.0.1
1.0.2
http://qgis.org/
qgis-theme-gis
1.0.1
1.0.2
http://qgis.org/
qgis-theme-nkids
1.0.1
1.0.2
http://qgis.org/
qucs
0.0.14
0.0.15
http://qucs.sourceforge.net/
scidavis
0.2.1
0.2.3
http://scidavis.sourceforge.net/
scitools
0.4
0.6
http://code.google.com/p/scitools/
scitools-extras
0.4
0.6
http://code.google.com/p/scitools/
sdcc
2.8.0
2.9.0
http://sdcc.sourceforge.net/
sdcc-libc-sources
2.8.0
2.9.0
http://sdcc.sourceforge.net/
toped
0.9.2
0.9.4
http://www.toped.org.uk
usrp
3.1.3
3.2.2
http://www.gnuradio.org
usrp-devel
3.1.3
3.2.2
http://www.gnuradio.org
vtk-examples
5.2.1
5.4.2
http://vtk.org/
vtk-testing
5.2.1
5.4.2
http://vtk.org/
wgrib
1.8.0.12u
1.8.0.13b
http://www.cpc.ncep.noaa.gov/products/wesley/wgrib.html
wgrib2
1.7.8g
1.8.1
http://www.cpc.ncep.noaa.gov/products/wesley/wgrib2/
wxMaxima
0.7.6
0.8.2
http://wxmaxima.sourceforge.net/
xcircuit
3.4.30
3.6.161
http://opencircuitdesign.com/xcircuit
xgridedit
4.4.0
4.5.0
http://gmt.soest.hawaii.edu/


320 packages, 113 changed, 207 unchanged.