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Revision as of 08:28, 22 July 2009 by Jussilehtola (talk | contribs) (Creating environment modules)

Packaging Draft / Use of environment modules


Introduction

When one has multiple programs serving the same purpose (for instance SMTP servers such as sendmail, exim and postfix; or print servers such as lprng and cups), it is usual to wrap these using alternatives. Alternatives provides a clean way to have many types of software serving the same purpose installed at the same time and have the commands such as mail and lpr point to the wanted versions.


However, when there are multiple variants that each serve the needs of some user and thus must be available simultaneously by users, the alternatives system simply isn't enough since it is system-wide. This has been reality on supercomputers and clusters for eons, and a solution has been developed: environment modules.


Using environment modules

To see what modules are available, run $ module avail. To load a module run e.g. $ module load openmpi-i386. To unload a module, run e.g. $module unload openmpi-i386.

The upstream documentation for the module command is available here.

Creating environment modules

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Packaging note
When creating RPMs containing module files, be sure to Requires: environment-modules for directory ownership and usability.

To create an environment module, place a module file into /etc/modulefiles/. The directory /usr/share/Modules/modulefiles is to be used only for internal modules of environment-modules.

The module files are plain text with a tcl syntax, for instance an environment module for 32-bit OpenMPI openmpi-i386:

#  OpenMPI module for use with 'environment-modules' package:
# 
prepend-path            PATH            /usr/lib/openmpi/1.3.3-gcc/bin
prepend-path            LD_LIBRARY_PATH /usr/lib/openmpi/1.3.3-gcc/lib
setenv                  MPI_BIN         /usr/lib/openmpi/1.3.3-gcc/bin
setenv                  MPI_LIB         /usr/lib/openmpi/1.3.3-gcc/lib
setenv                  MPI_HOME        /usr/lib/openmpi/1.3.3-gcc

The above prepends the path with the bindir of the 32-bit OpenMPI 1.3.3 compiled with GCC and adds the relevant library path. Then it sets five environment variables.

It is also possible to set CFLAGS and LDFLAGS with the above manner, but in the case of MPI compilers it is not necessary since the compilers are invoked with the mpicc, mpicxx, mpif77 and mpif90 wrappers that already contain the necessary include and library paths.

Also, in the case of development packages an override of CFLAGS and/or LDFLAGS is not sane, as it may cause trouble in building RPMs as it overrides %{optflags}.

The upstream documentation for module files is available here.