From Fedora Project Wiki
 
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== Fedora Medical group ==
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{{autolang|base=yes}}
  
Goal of this group is as follows:
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Fedora Medical Special Interest Group (SIG) is to enable a medical practice, the research, life sciences, bioinformatics and imaging into Fedora, and democratize the technologies for everyone.
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We prepares the packages associated with them.
  
#Finding out the use-cases of healthcare community.
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== Join Fedora Medical SIG and Contribute ==
#Finding out work-flows of usages.
 
#Finding out equivalent FOSS packages for those jobs.
 
#Packaging those for Fedora.
 
#Create a spin.
 
  
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=== Communication tools ===
  
== Interested People (Please add yourself)==
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* Mailing list: Go to [https://lists.fedoraproject.org/admin/lists/medical-sig.lists.fedorahosted.org/ the mailing list page], and subscribe. Mailing list address: '''medical-sig@lists.fedorahosted.org''' .
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* IRC: '''#fedora-medical''' at [https://freenode.net/ freenode].
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* Issue tracker and file management: https://pagure.io/fedora-medical The issue data was migrated from the old tracker Trac to the Pagure fedora-medical. If you want to open an existing package specific issue, you can use Bugzilla.
  
{|
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Please contact us on '''medical-sig@lists.fedorahosted.org''' if you need some helps. Subscribing the mailing list is encouraged.
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=== Interested People (Please add yourself) ===
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{| class="wikitable"
 
|-
 
|-
 
| [[user:susmit | Susmit Shannigrahi]] || [[user:Cwickert | Christoph Wickert]]
 
| [[user:susmit | Susmit Shannigrahi]] || [[user:Cwickert | Christoph Wickert]]
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| [[user:mrceresa | Mario Ceresa ]] || [[user:dahudje | Jérôme Velut ]]
 
| [[user:mrceresa | Mario Ceresa ]] || [[user:dahudje | Jérôme Velut ]]
 
|-
 
|-
| [[user:Ankursinha | Ankur Sinha]] || [[user:yevlempy | Harsh Verma]]
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| [[user:mhough | Morgan Hough ]] || [[user:yevlempy | Harsh Verma]]
 
|-
 
|-
 
| [[user:Drifter | Marcus Lines ]] || [[user:zoltanh721 | Zoltan Hoppar ]]
 
| [[user:Drifter | Marcus Lines ]] || [[user:zoltanh721 | Zoltan Hoppar ]]
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|-
 
|-
 
| [[user:sjodogne | Sébastien Jodogne ]] || [[user:fedvet | Simon Slater ]]
 
| [[user:sjodogne | Sébastien Jodogne ]] || [[user:fedvet | Simon Slater ]]
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|-
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| [[user:Mribeirodantas | Marcel Ribeiro Dantas ]] || [[user:mosburn | Michael Osburn ]]
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|-
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| [[user:jaruga | Jun Aruga ]] || [[user:sagitter | Antonio Trande ]]
 
|-
 
|-
 
|}
 
|}
  
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== Packages ==
  
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=== Tasks - Fedora medical packages by category ===
  
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{| class="wikitable"
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|-
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! Category !! Description !! [https://koschei.fedoraproject.org/groups Koschei group]
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|-
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| All || All the package managed by Medical SIG. || [https://koschei.fedoraproject.org/groups/medical-sig?untracked=1 medical-sig]
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|-
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| Biology || Bioinformatics, Computing biology, Genomics || [https://koschei.fedoraproject.org/groups/biology?untracked=1 biology]
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|-
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|}
  
== Workflow/Groups ==
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When creating a new category, please consider the name with [https://blends.debian.org/med/tasks/ Debian Med team's tasks].
 
 
* [[practitioner workflow |General Practitioner's work-flow]]
 
* [[Dental software ]]
 
* '''New!''' [[Medical Imaging]]
 
* [[Misc tools]]
 
* '''New!''' [[Speech Analysis]]
 
 
 
== Device drivers/interfaces/mobile devices ==
 
* http://code.google.com/p/zephyropen/
 
* http://www.emsp.tu-berlin.de/research/body-sensor-network/body-sensor-network-for-personal-healthcare-systems?set_language=en&cl=en
 
 
 
== Packages ==
 
* [http://wiki.gnumed.de/bin/view/Gnumed/FedoraGuideShort GNUmed EMR]
 
* [http://sourceforge.net/apps/mediawiki/gdcm/index.php?title=Main_Page gdcm] - Grassroots DiCoM medical image parser
 
* [[medical_freemedforms|FreeMedForms EMR / FreeDiams prescriber]]
 
  
== Imaging softwares ==
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If you are interested in neuroscience (or neurobiology), [[SIGs/NeuroFedora|NeuroFedora SIG]] ([https://koschei.fedoraproject.org/groups/neuro-sig Koschei group]) is the place.
* [[fedora medical imaging softwares]]
 
  
== Package Review Requests ==
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If you are interested in science, [https://fedoraproject.org/wiki/Category:SciTech_SIG SciTech SIG] ([https://koschei.fedoraproject.org/groups/scitech_sig Koschei group]) is the place.
* PACKAGED! [https://bugzilla.redhat.com/show_bug.cgi?id=539387 InsightToolkit] - Medical imaging processing library
 
  
* PACKAGED! [https://bugzilla.redhat.com/show_bug.cgi?id=573910 DCMTK] - A collection of libraries implementing large parts of the DICOM standard
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=== Copr ===
  
* [https://bugzilla.redhat.com/show_bug.cgi?id=827723 GNU Health] - The free Health and Hospital Information System
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Some of the medical packages are available on Copr.
  
* PACKAGED! [https://bugzilla.redhat.com/show_bug.cgi?id=888301 Orthanc] - Lightweight, RESTful DICOM server
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* [https://copr.fedorainfracloud.org/coprs/loveshack/livhpc/ loveshack/livhpc]: Thanks Dave!
  
* [http://openeeg.sourceforge.net/doc/ OpenEEG] - Open source EEG
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== Fedora Packaging Guidelines for Medical ==
  
* [http://sourceforge.net/projects/ecgtoolkit-cs/ Open source ECG]
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Main article: [https://fedoraproject.org/wiki/Medical/Packaging Fedora Packaging Guidelines for Medical]
  
* [http://sourceforge.net/projects/nplabs/files/libomron/0.9.0/ LibOmron, Omron usb devices driver]
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== COVID-19 ==
  
* PACKAGED! [https://bugzilla.redhat.com/show_bug.cgi?id=962490] - Octave dicom package
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Main article: [https://fedoraproject.org/wiki/Medical/COVID-19 Medical/COVID-19]
  
== Resources ==
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As many people are interested in the topic now, we created the page for people who want to contribute to the open source projects or do RPM packaging.
  
Mailing list: https://fedorahosted.org/mailman/listinfo/medical-sig<br/>
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== Memo ==
Trac: https://fedorahosted.org/fedora-medical/<br/>
 
IRC: #fedora-medical
 
  
== Meeting notes ==
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Main article: [https://fedoraproject.org/wiki/Medical/Memo Medical/Memo]
* [http://meetbot.fedoraproject.org/fedora-meeting/2010-01-19/fedora-meeting.2010-01-19-18.01.html Meeting on Jan 10th 2010]  
 
  
== Links ==
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Some rarely used, experimental or deprecated sections are managed at [https://fedoraproject.org/wiki/Medical/Memo the Medical SIG's memo page].
#http://www.mail-archive.com/fedora-india@redhat.com/msg01737.html
 
#http://en.wikipedia.org/wiki/List_of_open_source_healthcare#Public_Health_and_Biosurveillance
 
#http://sourceforge.net/search/?type_of_search=soft&words=medical
 
#http://www.mirthcorp.com/community/overview
 
#http://openmrs.org/wiki/OpenMRS_Overview
 
#http://www.openxdata.org/
 
#http://www.dimagi.com/content/javarosa.html
 
#http://code.google.com/p/purcforms/
 
#http://www.apfelkraut.org/freemedsw/
 
#http://debian-med.alioth.debian.org/tasks/
 
#http://medfoss.apfelkraut.org/
 
  
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[[Category:SIGs]]
 
[[Category:Fedora special-interest groups]]
 
[[Category:Fedora special-interest groups]]

Latest revision as of 21:01, 27 April 2020

Fedora Medical Special Interest Group (SIG) is to enable a medical practice, the research, life sciences, bioinformatics and imaging into Fedora, and democratize the technologies for everyone. We prepares the packages associated with them.

Join Fedora Medical SIG and Contribute

Communication tools

  • Mailing list: Go to the mailing list page, and subscribe. Mailing list address: medical-sig@lists.fedorahosted.org .
  • IRC: #fedora-medical at freenode.
  • Issue tracker and file management: https://pagure.io/fedora-medical The issue data was migrated from the old tracker Trac to the Pagure fedora-medical. If you want to open an existing package specific issue, you can use Bugzilla.

Please contact us on medical-sig@lists.fedorahosted.org if you need some helps. Subscribing the mailing list is encouraged.

Interested People (Please add yourself)

Susmit Shannigrahi Christoph Wickert
Luis Ibanez Efstathios Iosifidis
Ben Lambrechts Mary-Anne Wolf
Sebastian Hilbert Yumas Hankouri
Mario Ceresa Jérôme Velut
Morgan Hough Harsh Verma
Marcus Lines Zoltan Hoppar
Daniel VanStone Gareth John
Theodore Papadopoulo Mary-Anne Wolf
Praveen Kumar Robert Beatty
Leon Keijser James Regis
Kalpa Pathum Welivitigoda Prabin Kumar Datta
Tom Wroblewski Arnaud Gelas
David Deutschmann Arnold Laurinaria
Michel Alexandre Salim Siddharth Waikar
Sébastien Jodogne Simon Slater
Marcel Ribeiro Dantas Michael Osburn
Jun Aruga Antonio Trande

Packages

Tasks - Fedora medical packages by category

Category Description Koschei group
All All the package managed by Medical SIG. medical-sig
Biology Bioinformatics, Computing biology, Genomics biology

When creating a new category, please consider the name with Debian Med team's tasks.

If you are interested in neuroscience (or neurobiology), NeuroFedora SIG (Koschei group) is the place.

If you are interested in science, SciTech SIG (Koschei group) is the place.

Copr

Some of the medical packages are available on Copr.

Fedora Packaging Guidelines for Medical

Main article: Fedora Packaging Guidelines for Medical

COVID-19

Main article: Medical/COVID-19

As many people are interested in the topic now, we created the page for people who want to contribute to the open source projects or do RPM packaging.

Memo

Main article: Medical/Memo

Some rarely used, experimental or deprecated sections are managed at the Medical SIG's memo page.